projects / text-levenshtein-edlib.git / blame
| Commit | Line | Data |
|---|---|---|
| a99d15a3 MG |
1 | #define PERL_NO_GET_CONTEXT |
| 2 | #include "EXTERN.h" | |
| 3 | #include "perl.h" | |
| 4 | #include "XSUB.h" | |
| 5 | ||
| 6 | #include "ppport.h" | |
| 7 | ||
| 8 | #include <edlib.h> | |
| 9 | ||
| 10 | #include "const-c.inc" | |
| 11 | ||
| 12 | MODULE = Text::Levenshtein::Edlib PACKAGE = Text::Levenshtein::Edlib | |
| 13 | ||
| 14 | INCLUDE: const-xs.inc | |
| 15 | PROTOTYPES: ENABLE | |
| 16 | ||
| 17 | SV* | |
| 18 | edlibAlign(const char *query, int length(query), const char *target, int length(target), int k, int mode, int task) | |
| 19 | PREINIT: | |
| 20 | EdlibAlignResult align_result; | |
| 21 | SV *returned_av_ref; | |
| 22 | AV *returned_av, *endAV, *startAV, *alignAV; | |
| 23 | int i; | |
| 24 | CODE: | |
| 25 | align_result = edlibAlign(query, XSauto_length_of_query, target, XSauto_length_of_target, edlibNewAlignConfig(k, mode, task)); | |
| 26 | returned_av = newAV(); | |
| 27 | av_push(returned_av, newSViv(align_result.editDistance)); | |
| 28 | av_push(returned_av, newSViv(align_result.alphabetLength)); | |
| 29 | if(align_result.endLocations == NULL) | |
| 30 | av_push(returned_av, &PL_sv_undef); | |
| 31 | else { | |
| 32 | endAV = newAV(); | |
| 33 | for(i = 0 ; i < align_result.numLocations ; i++) | |
| 34 | av_push(endAV, newSViv(align_result.endLocations[i])); | |
| 35 | av_push(returned_av, newRV_noinc((SV*)endAV)); | |
| 36 | } | |
| 37 | if(align_result.startLocations == NULL) | |
| 38 | av_push(returned_av, &PL_sv_undef); | |
| 39 | else { | |
| 40 | startAV = newAV(); | |
| 41 | for(i = 0 ; i < align_result.numLocations ; i++) | |
| 42 | av_push(startAV, newSViv(align_result.startLocations[i])); | |
| 43 | av_push(returned_av, newRV_noinc((SV*)startAV)); | |
| 44 | } | |
| 45 | if(align_result.alignment == NULL) | |
| 46 | av_push(returned_av, &PL_sv_undef); | |
| 47 | else { | |
| 48 | startAV = newAV(); | |
| 49 | for(i = 0 ; i < align_result.alignmentLength ; i++) | |
| 50 | av_push(startAV, newSViv(align_result.alignment[i])); | |
| 51 | av_push(returned_av, newRV_noinc((SV*)startAV)); | |
| 52 | } | |
| 53 | edlibFreeAlignResult(align_result); | |
| 54 | RETVAL = newRV_noinc((SV*)returned_av); | |
| 55 | OUTPUT: | |
| 56 | RETVAL | |
| 329961ff MG |
57 | |
| 58 | ||
| 59 | char* | |
| 60 | edlibAlignmentToCigar(unsigned char *alignment, int length(alignment), int format) |